The expertise of the platform is versatile on many aspects of high-throughput data management, processing, integration and statistical and functional analysis in biology and in clinics.
Many data types are treated:
Microarrays: expression, copy number, SNP, ChIP
NanoString
NGS: Exome-seq, targeted-seq, WGS, RNA-seq, smallRNA-seq, 5C, HiC, ChIP-seq …
RPPA,
Mass spectometry, classical and SILAC, SWATH
low-throughput biological data.
The expertise covers fundamental, translational and clinical research, including clinical trials.
In all these domain, the platform also develop appropriate methods, implement tools and automatic pipelines, and package and release them publicly or grant on-line access to the community.
Software optimisation for high-performance computing is also part of our know-how.
Finally the platform has developed an experience in training biologists, clinicians and bioinformaticians in all above-mentionned fields
